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OALib Journal期刊
ISSN: 2333-9721
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主页: https://journals.plos.org/ploscompbiol/

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Multiple-target tracking in human and machine vision

Ali Borji,Fatemeh Ghezloo,Hamid Abrishami Moghaddam,Reza Lashgari,Shiva Kamkar

On the choice of metric in gradient-based theories of brain function

Jean-Pascal Pfister,Johanni Brea,Simone Carlo Surace,Wulfram Gerstner

Ten simple rules for innovative dissemination of research

Daniela Luzi,Edit Gorogh,Electra Sifacaki,Jonathan P. Tennant,Lucio Pisacane,Michela Vignoli,Peter Kraker,Roberta Ruggieri,Tony Ross-Hellauer,Vilt？ Banelyt？

Computational optimization of associative learning experiments

Dominik R. Bach,Filip Melinscak

Phenotypic delay in the evolution of bacterial antibiotic resistance: Mechanistic models and their implications

Bartlomiej Waclaw,Elin E. Lilja,Martín Carballo-Pacheco,Michael D. Nicholson,Rosalind J. Allen

Interpreting neural decoding models using grouped model reliance

Maximilian Harkotte,Simon Valentin,Tzvetan Popov

Ten simple rules to run a successful BioHackathon

Alexander Garcia,Erick Antezana,Evan Bolton,Juan M. Banda,Leyla Garcia,Pjotr Prins,Rafael Jimenez,Toshiaki Katayama

Atypical structural tendencies among low-complexity domains in the Protein Data Bank proteome

Eric D. Ross,Mikaela R. Elder,Sean M. Cascarina

Nucleosome positioning sequence patterns as packing or regulatory

Erinija Pranckeviciene,Ilya Ioshikhes,Nathan Liang,Sergey Hosid

Dimensionality, information and learning in prefrontal cortex

Andrew R. Mitz,Bruno B. Averbeck,Ramon Bartolo,Richard C. Saunders

Telling ecological networks apart by their structure: An environment-dependent approach

Chuliang Song,Serguei Saavedra

Learning action-oriented models through active inference

Alexander Tschantz,Anil K. Seth,Christopher L. Buckley

Standard multiscale entropy reflects neural dynamics at mismatched temporal scales: What’s signal irregularity got to do with it?

Douglas D. Garrett,Julian Q. Kosciessa,Niels A. Kloosterman

Mechanistic modeling of light-induced chemotactic infiltration of bacteria into leaf stomata

Ashim K. Datta,Mina Solhtalab,Mohsen Ranjbaran

Dynamic metabolic adaptation can promote species coexistence in competitive microbial communities

Amos Maritan,Andrea Giometto,Leonardo Pacciani-Mori,Samir Suweis

Modeling cross-regulatory influences on monolignol transcripts and proteins under single and combinatorial gene knockdowns in Populus trichocarpa

Cranos M. Williams,Jack P. Wang,Megan L. Matthews,Ronald Sederoff,Vincent L. Chiang

An Evolutionary Trace method defines functionally important bases and sites common to RNA families

Angela D. Wilkins,Ilya B. Novikov,Olivier Lichtarge

Combining molecular dynamics simulations with small-angle X-ray and neutron scattering data to study multi-domain proteins in solution

Andreas Haahr Larsen,Kresten Lindorff-Larsen,Lise Arleth,Sandro Bottaro,Sergei Grudinin,Yong Wang

A model for time interval learning in the Purkinje cell

Ajmal Zemmar,Daniel Majoral,Raul Vicente

Ion channel noise shapes the electrical activity of endocrine cells

David M. Richards,Jamie J. Walker,Joel Tabak

Modeling binary and graded cone cell fate patterning in the mouse retina

Cameron Avelis,Elijah Roberts,Kiara C. Eldred,Robert J. Johnston Jr

Inference of coevolutionary dynamics and parameters from host and parasite polymorphism data of repeated experiments

Aurélien Tellier,Hanna M？rkle

Methods detecting rhythmic gene expression are biologically relevant only for strong signal

David Laloum,Marc Robinson-Rechavi

Surprise response as a probe for compressed memory states

Hadar Levi-Aharoni,Naftali Tishby,Oren Shriki

Increasing growth rate slows adaptation when genotypes compete for diffusing resources

Allison K. Shaw,Jeremy M. Chacón,William R. Harcombe

Scedar: A scalable Python package for single-cell RNA-seq exploratory data analysis

Ben Stear,Deanne M. Taylor,Erin R. Reichenberger,Man S. Kim,Yuanchao Zhang

Methodological challenges in translational drug response modeling in cancer: A systematic analysis with FORESEE

Ali Hadizadeh Esfahani,Andreas Schuppert,Lisa-Katrin Sch？tzle

Climbing Escher’s stairs: A way to approximate stability landscapes in multidimensional systems

Egbert H. van Nes,Marten Scheffer,Pablo Rodríguez-Sánchez

Nonlinear mixed selectivity supports reliable neural computation

David J. Freedman,Stephanie E. Palmer,W. Jeffrey Johnston

Long-range correlation in protein dynamics: Confirmation by structural data and normal mode analysis

Kunihiko Kaneko,Qian-Yuan Tang

ProteoClade: A taxonomic toolkit for multi-species and metaproteomic analysis

Arshag D. Mooradian,Jason M. Held,Kristen M. Naegle,Sjoerd van der Post

Parallel Tempering with Lasso for model reduction in systems biology

James R. Faeder,Robin E. C. Lee,Sanjana Gupta

Fly-QMA: Automated analysis of mosaic imaginal discs in Drosophila

Luís A. N. Amaral,Neda Bagheri,Nicolás Peláez,Richard W. Carthew,Sebastian M. Bernasek

Improving reproducibility in computational biology research

Anand Rampadarath,David Nickerson,Feilim Mac Gabhann,Herbert M. Sauro,Jason A. Papin

Coding with transient trajectories in recurrent neural networks

Giulio Bondanelli,Srdjan Ostojic

Neurogranin stimulates Ca2+/calmodulin-dependent kinase II by suppressing calcineurin activity at specific calcium spike frequencies

Lu Li,Massimo Lai,Nicolas Le Novère,Stephen Cole,Stuart J. Edelstein

Direct coupling analysis of epistasis in allosteric materials

Barbara Bravi,Carolina Brito,Matthieu Wyart,Riccardo Ravasio

Efficient and flexible representation of higher-dimensional cognitive variables with grid cells

Ila Fiete,Marcus Lewis,Mirko Klukas

Emergence and suppression of cooperation by action visibility in transparent games

Alexander Gail,Anton M. Unakafov,Fred Wolf,Igor Kagan,Sebastian Moeller,Stephan Eule,Thomas Schultze

Learning from animals: How to Navigate Complex Terrains

Armin Ataei,Hao Liu,Henghui Zhu,Ioannis Ch. Paschalidis,Thomas Daniel,Yonatan Munk

A single reaction-diffusion equation for the multifarious eruptions of urticaria

Michihiro Hide,Shunsuke Takahagi,Sungrim Seirin-Lee,Yuhki Yanase

Medusa: Software to build and analyze ensembles of genome-scale metabolic network reconstructions

Gregory L. Medlock,Jason A. Papin,Thomas J. Moutinho

Modular analysis of the control of flagellar Ca2+-spike trains produced by CatSper and CaV channels in sea urchin sperm

Adán Guerrero,Alberto Darszon,Ana Laura González-Cota,Daniel A. Priego-Espinosa,Gustavo Martínez-Mekler,Jorge Carneiro,Takuya Nishigaki

Human decision making anticipates future performance in motor learning

Daniel J. Gale,Daniel M. Wolpert,J. Randall Flanagan,Jason P. Gallivan,Joshua B. Moskowitz

Dynamic integration of forward planning and heuristic preferences during multiple goal pursuit

Alexander Strobel,Dimitrije Markovi？,Florian Ott,Stefan J. Kiebel

3D mesh processing using GAMer 2 to enable reaction-diffusion simulations in realistic cellular geometries

Christopher T. Lee,J. Andrew McCammon,Justin G. Laughlin,Michael Holst,Nils Angliviel de La Beaumelle,Padmini Rangamani,Ravi Ramamoorthi,Rommie E. Amaro

Near-optimal combination of disparity across a log-polar scaled visual field

Fabio Solari,Guido Maiello,Manuela Chessa,Peter J. Bex

Deep reinforcement learning for the control of microbial co-cultures in bioreactors

Alex J. H. Fedorec,Brian Ingalls,Chris P. Barnes,Neythen J. Treloar

Transient amplifiers of selection and reducers of fixation for death-Birth updating on graphs

Benjamin Allen,Christine Sample,Darren Parke,Gabor Lippner,James Withers,Joshua Kolodny,Lori Brizuela,Patricia Steinhagen,Robert Jencks,Yulia A. Dementieva

Ten Simple Rules to becoming a principal investigator

Jason E. McDermott,John S. Tregoning

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